Introduction#

hictkpy provides Python bindings to hictk, a blazing fast toolkit to work with .hic and .cool files.

Documentation formats#

You are reading the HTML version of the documentation. An alternative PDF version is also available.

Installation#

Python bindings for hictk can be installed using pip or conda. See here for more details.

How to cite this project?#

Please use the following BibTeX template to cite hictkpy in scientific discourse:

@misc{hictk,
   author = {Roberto Rossini},
   year = {2023},
   note = {https://github.com/paulsengroup/hictk},
   title = {hictk: blazing fast toolkit to work with .hic and .cool files}
}

Table of contents#

Installation
Quickstart

API Reference

Python API